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 Bioinformatics

2016

Running bugwas + gen files 09-08
Mean coverage from a BAM one-liner 05-25
Installing PEER executable peertool 01-19

2015

Simulate disease state from a given odds ratio, fraction exposed, fraction affected 10-09
Using ALF to simulate large, closely related populations of bacteria 06-10

2014

A hierarchical Bayesian model using multinomial and Dirichlet distributions in JAGS 12-17
Installing Cactus (progressiveCactus) 10-28
Diagnosing results/status of lots of LSF jobs 10-16
Compiling Stampy v1.0.23 for use with cortex - error: unrecognized command line option ‘-Wl’ 05-15
Impute your whole genome from 23andme data 03-18
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 John Lees